gsea java application Search Results


gsea java desktop application  (BioCarta)
90
BioCarta gsea java desktop application
Gsea Java Desktop Application, supplied by BioCarta, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gsea+java+application/pm37620794-155-6-52?v=BioCarta
Average 90 stars, based on 1 article reviews
gsea java desktop application - by Bioz Stars, 2026-08
90/100 stars
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gsea java application for mac  (Broad Institute Inc)
90
Broad Institute Inc gsea java application for mac
A) Mechanical thresholds of mock, IAV, and SARS-CoV-2 animals at 28dpi (n=6 per group; **p<0.01, ****p<0.0001 for one-way ANOVA Tukey’s m.c.). B) Volcano plot for 31dpi SARS-CoV-2 tDRG RNA-seq (n=3 per group). Red=p-adj.<0.1, log2FC>0. Blue=p-adj.<0.1, log2FC>0. Green=p-nom.<0.05. C) IPA top 10 canonical pathways (−log10(p-value)>1.3) associated with 31dpi SARS-CoV-2 tDRG DEGs (p-nom.<0.05). D) enrichr DisGENET gateway top 10 diseases associated with 31 dpi SARS-CoV-2 tDRG DEGs (p-nom.<0.05). E) Log 2 (FC) of select neuronal and inflammatory genes from 31dpi RNA-seq (p-adj.<0.1). F) Positively and negatively enriched cell subtypes associated with 31dpi SARS-CoV-2 tDRG DEGs <t>(GSEA</t> NES>|1.5|; DEG p-adj.<0.1). G) IPA top 15 upstream regulators between 31dpi SARS-CoV-2 tDRG, Striatum, and Thalamus (DEG p-nom.<0.05).
Gsea Java Application For Mac, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gsea+java+application/pmc09413707-255-8-16?v=Broad+Institute+Inc
Average 90 stars, based on 1 article reviews
gsea java application for mac - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier

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A) Mechanical thresholds of mock, IAV, and SARS-CoV-2 animals at 28dpi (n=6 per group; **p<0.01, ****p<0.0001 for one-way ANOVA Tukey’s m.c.). B) Volcano plot for 31dpi SARS-CoV-2 tDRG RNA-seq (n=3 per group). Red=p-adj.<0.1, log2FC>0. Blue=p-adj.<0.1, log2FC>0. Green=p-nom.<0.05. C) IPA top 10 canonical pathways (−log10(p-value)>1.3) associated with 31dpi SARS-CoV-2 tDRG DEGs (p-nom.<0.05). D) enrichr DisGENET gateway top 10 diseases associated with 31 dpi SARS-CoV-2 tDRG DEGs (p-nom.<0.05). E) Log 2 (FC) of select neuronal and inflammatory genes from 31dpi RNA-seq (p-adj.<0.1). F) Positively and negatively enriched cell subtypes associated with 31dpi SARS-CoV-2 tDRG DEGs (GSEA NES>|1.5|; DEG p-adj.<0.1). G) IPA top 15 upstream regulators between 31dpi SARS-CoV-2 tDRG, Striatum, and Thalamus (DEG p-nom.<0.05).

Journal: bioRxiv

Article Title: SARS-CoV-2 Airway Infection Results in Time-dependent Sensory Abnormalities in a Hamster Model

doi: 10.1101/2022.08.19.504551

Figure Lengend Snippet: A) Mechanical thresholds of mock, IAV, and SARS-CoV-2 animals at 28dpi (n=6 per group; **p<0.01, ****p<0.0001 for one-way ANOVA Tukey’s m.c.). B) Volcano plot for 31dpi SARS-CoV-2 tDRG RNA-seq (n=3 per group). Red=p-adj.<0.1, log2FC>0. Blue=p-adj.<0.1, log2FC>0. Green=p-nom.<0.05. C) IPA top 10 canonical pathways (−log10(p-value)>1.3) associated with 31dpi SARS-CoV-2 tDRG DEGs (p-nom.<0.05). D) enrichr DisGENET gateway top 10 diseases associated with 31 dpi SARS-CoV-2 tDRG DEGs (p-nom.<0.05). E) Log 2 (FC) of select neuronal and inflammatory genes from 31dpi RNA-seq (p-adj.<0.1). F) Positively and negatively enriched cell subtypes associated with 31dpi SARS-CoV-2 tDRG DEGs (GSEA NES>|1.5|; DEG p-adj.<0.1). G) IPA top 15 upstream regulators between 31dpi SARS-CoV-2 tDRG, Striatum, and Thalamus (DEG p-nom.<0.05).

Article Snippet: Gene set enrichment analyses were conducted using the GSEA Java application for Mac (v 4.1.0) (MSigDB; Broad Institute, UC San Diego).

Techniques: RNA Sequencing